MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
19428wE1_BL01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 24
bases: 2,837,491 bps
CDS: 2,819
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,888
Total number of protein coding genes annotated/found:
2,819
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5031|JADGMG010000001.1
SEQF5031_00026
Genome Viewer
NA
AA
180/60
21257-21436
Protein translocase subunit SecE
SEQF5031|JADGMG010000001.1
SEQF5031_00027
Genome Viewer
NA
AA
549/183
21451-21999
Transcription termination/antitermination protein NusG
SEQF5031|JADGMG010000001.1
SEQF5031_00028
Genome Viewer
NA
AA
423/141
22147-22569
50S ribosomal protein L11
SEQF5031|JADGMG010000001.1
SEQF5031_00029
Genome Viewer
NA
AA
693/231
22684-23376
50S ribosomal protein L1
SEQF5031|JADGMG010000001.1
SEQF5031_00030
Genome Viewer
NA
AA
507/169
23601-24107
50S ribosomal protein L10
SEQF5031|JADGMG010000001.1
SEQF5031_00031
Genome Viewer
NA
AA
363/121
24148-24510
50S ribosomal protein L7/L12
SEQF5031|JADGMG010000001.1
SEQF5031_00032
Genome Viewer
NA
AA
609/203
24593-25201
Ribosomal RNA small subunit methyltransferase C
SEQF5031|JADGMG010000001.1
SEQF5031_00033
Genome Viewer
NA
AA
3555/1185
25407-28961
DNA-directed RNA polymerase subunit beta
SEQF5031|JADGMG010000001.1
SEQF5031_00034
Genome Viewer
NA
AA
3609/1203
29062-32670
DNA-directed RNA polymerase subunit beta'
SEQF5031|JADGMG010000001.1
SEQF5031_00035
Genome Viewer
NA
AA
255/85
32806-33060
Ribosome-associated protein L7Ae-like protein
SEQF5031|JADGMG010000001.1
SEQF5031_00036
Genome Viewer
NA
AA
423/141
33152-33574
30S ribosomal protein S12
SEQF5031|JADGMG010000001.1
SEQF5031_00037
Genome Viewer
NA
AA
471/157
33660-34130
30S ribosomal protein S7
SEQF5031|JADGMG010000001.1
SEQF5031_00038
Genome Viewer
NA
AA
2082/694
34273-36354
Elongation factor G
SEQF5031|JADGMG010000001.1
SEQF5031_00039
Genome Viewer
NA
AA
1191/397
36491-37681
Elongation factor Tu
SEQF5031|JADGMG010000001.1
SEQF5031_00040
Genome Viewer
NA
AA
1176/392
38929-37754
N-acetylcysteine deacetylase
SEQF5031|JADGMG010000001.1
SEQF5031_00041
Genome Viewer
NA
AA
1200/400
40112-38913
N-acetylcysteine deacetylase
SEQF5031|JADGMG010000001.1
SEQF5031_00042
Genome Viewer
NA
AA
1170/390
41284-40115
N-acetylcysteine deacetylase
SEQF5031|JADGMG010000001.1
SEQF5031_00043
Genome Viewer
NA
AA
1188/396
41438-42625
Putative pyridoxal phosphate-dependent acyltransferase
SEQF5031|JADGMG010000001.1
SEQF5031_00044
Genome Viewer
NA
AA
963/321
43053-44015
putative epimerase/dehydratase
SEQF5031|JADGMG010000001.1
SEQF5031_00045
Genome Viewer
NA
AA
1095/365
44122-45216
putative branched-chain-amino-acid aminotransferase
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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